Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944888.1_cds_XP_016487588.1_78309
CDS Infomation

[gene=LOC107807673] [db_xref=GeneID:107807673] [protein=probable serine/threonine-protein kinase At5g41260] [protein_id=XP_016487588.1] [location=complement(join(67722..67964,68067..68180,68620..68772,69025..69213,69565..69650,69824..69929,70037..70170,71478..71613,72011..72228,72323..72401))] [gbkey=CDS]
Sequence

ATGGGCTGTGAATATTCTAAATTTGCCTCGTGTTGCTGGACAGGACAGAGTGGCCCCATT
CACGAGGCTCAAAATCCTGATGAAGAAAAAGATGAAGTTAGTGATTTGCCTGCATTCCAC
GAGTTTACGTTTGAGCAGCTCAGGATAGCTACATCTGCATTTGCTGTAGAGAATATTGTT
TCGGAACACGGTGTGAAAGCTCCAAATGTTGTTTATAAAGGAAAGCTGGAGAACCAGAGA
CCGGTTGCCGTTAAACGCTTCAACAGATCTGCGTGGCCTGATTCCCGGCAGTTTTTAGAA
GAAGCAAGGGCCGTCGGTCAACTCCGCAACAATAGGTTAGCAAATCTTCTTGGCTGTTGC
TGCGAGGGTGATGAGAGGTTGCTAGTTGCAGACTTCATTCCCAATGAAACACTTGCAAAG
CATCTTTTTCATTGGGACACACAACCAATGAAGTGGGCAATGCGGTTAAGGGTGGCCTTG
TATATTGCACAGGCTCTTGAATATTGTACAGACAAAGGGCGTGCTCTTTATCATGATCTT
AATGCTTATAGAATATTATTCGATGAAGATGGTGATCCCCGACTCTCTTGTTTTGGTTTG
ATGAAGAACAGTCGAGATGGAAAAAGTTACAGCACAAACTTGGCATTTACTCCTCCTGAA
TATTTGAGGACAGGAAGAATCACCCCAGAGAGTGTGATATTTAGCTTCGGGACACTTTTG
CTTGACCTTCTCAGTGGAAAACACATCCCTCCTAGCCATGCACTGGATCTGATAAAAGAC
CGGAATCTTCAGATGCTAACTGATTCTTGCTTGGAAGGTCAATTTTCTACAGATGACGGA
ACTGAATTGGTACGGATTGCTTCAAGATGTCTACAATACGAGCCTCGTGAGCGGCCGAAT
CTCAAGTCATTAGTTGCTGCATTATATCCTCTTCAAAAAGAAGCTGAGGTTCCCTCTCAT
GTATTGATGGGTATATCACGTGATGGCGAAACTATGTCTCTATCTCCACTTGGTGAAGCT
TGTTTGAAAACCGACTTGACTGCCATCCATGAGATTTTAGACACGCTTGGGTACAAAGAT
GATGAGGGAGCAGCTACTGAGCTTTCATTTCAGATGTGGACAGATCAGATGCTGGAAACA
TTGAACTCAAAGAAAAAGGGTGATGTTGCTTTCAAGAACAAAGATTTTAGAGCTGCCATT
GAATGCTATACGAAGTTTATCGATGTTGGAACCATGGTCTCACCAACTGTGTACGCTCAT
CGGAGTCTGTCTTATCTCATGAGTGATATGCCACAAGAAGCCCTCAACGATGCAGTACAA
GCACAAGTAATATCTCCTGTTTGGCATATCGCATCGTATTTGCAAGCTGCTTCTCTTTTC
ACATTGGGGAGGGAAAACGAGGCACAAGTCACACTTAGAGAGGCTGCCATACTCGAAGAA
GAGAAGAACACAACTTGA

Peptide Sequence

PEP ID

XP_016487588.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase At5g41260 [Nicotiana tabacum]
Sequence

MGCEYSKFASCCWTGQSGPIHEAQNPDEEKDEVSDLPAFHEFTFEQLRIATSAFAVENIV
SEHGVKAPNVVYKGKLENQRPVAVKRFNRSAWPDSRQFLEEARAVGQLRNNRLANLLGCC
CEGDERLLVADFIPNETLAKHLFHWDTQPMKWAMRLRVALYIAQALEYCTDKGRALYHDL
NAYRILFDEDGDPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVIFSFGTLL
LDLLSGKHIPPSHALDLIKDRNLQMLTDSCLEGQFSTDDGTELVRIASRCLQYEPRERPN
LKSLVAALYPLQKEAEVPSHVLMGISRDGETMSLSPLGEACLKTDLTAIHEILDTLGYKD
DEGAATELSFQMWTDQMLETLNSKKKGDVAFKNKDFRAAIECYTKFIDVGTMVSPTVYAH
RSLSYLMSDMPQEALNDAVQAQVISPVWHIASYLQAASLFTLGRENEAQVTLREAAILEE
EKNTT

Transcript Sequence

Gene sequence data has not been registered.